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dc.contributor.authorDwivany, Fenny Martha
dc.contributor.authorBrotosudarmo, Tatas Hardo Panintingjati
dc.contributor.authorSukriandi, Nisrina
dc.contributor.authorMeitha, Karlia
dc.date.accessioned2023-02-06T02:15:48Z
dc.date.available2023-02-06T02:15:48Z
dc.date.issued2021
dc.identifier.issn2231-8534
dc.identifier.urihttp://dspace.uc.ac.id/handle/123456789/5854
dc.description.abstractβ-carotene is an important nutritional content in banana. However, its lifetime depends on the enzymes controlling its conversion into strigolactone. To understand the involved enzymes’ activity, which are β-carotene isomerase (D27), carotenoid cleavage dioxygenase 7 (CCD7), and CCD8, would be the key to manipulate the rate of β-carotene degradation. In this research, the structure of genes and proteins of the D27, CCD7, and CCD8 from Musa acuminata were characterized. ‘DH-Pahang’ and Musa balbisiana ‘Pisang Klutuk Wulung’ (PKW). The corresponding sequence of genes from both species were aligned to determine similarity and intron/exon positions. Domains and motifs in the sequences of putative proteins of D27, CCD7, and CCD8 were also identified. It was found that D27, CCD7, and CCD8 genes in DH-Pahang and PKW comprise of various nucleotide sequence length, putative proteins, and numbers and length of exons and introns. However, the putative proteins possess the same domains: DUF4033 (domain of unknown function) in D27 and RPE65 (retinal pigment epithelium) in CCD7 and CCD8. Phylogenetic trees showed that D27, CCD7, and CCD8 proteins from DH-Pahang and PKW are conserved and clustered in the same clades with the same proteins of monocot plants. Hence, the results could be useful for future research in optimizing β-carotene content in banana.en_US
dc.publisherPertanika Journal of Tropical Agriculture Scienceen_US
dc.subjectA genome, B genome, β-carotene, CCD, D27en_US
dc.titleIn Silico characterization of the structure of genes and proteins related to b-carotene degradation in Musa acuminata 'DHPahang' and Musa balbisiana 'Pisang Klutuk Wulung'en_US
dc.typeArticleen_US


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